HBVdb

Dataset for protein Pol of genotype C

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        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
          :              :          :.   :.             .    .    **      .     
MPLSYQHFRKLLLL--DD--EAGPLEEELPRLADEGLNRRVAEDLNLGNLNVSIPWTHKVGNFTGLYSSTVPVFNPeWQT
         r       n  d              d  h    e    dp  n                 a i  sd k 
                 e                                                              
                                                                                
                                                                                
                                                                                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* :*  .             .  .                .      .   .                   *      * 
PSFPhIHLqEDIInRCQQyVGPLTVNEKRRLKLIMPARFYPNLTKYLPLDKGIKPYYPEHaVNHYFkTRHYLHTLWKAGI
      k    d  e f     i      r v     f kr   w            yt     qa           v
      r    t                            i                ni                   
                                                          v                   
                                                                                
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
          .    .*                              .                      .    .    
LYKRETTRSASFCGSPYSWEQELQH-GRLVFQ--TStRHGDesFCSQSSGILSRSPVGPcvRSQlKQSRLGLQPQQGSlA
       h                - -----h    k    kplgakp   faqps  sgiq  f        s   pm 
                            sflk    e      vr              sfw                  
                                                                                
                                                                                
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
rGKsGRSGsIRARVHpTTRr----SFGVEPSGSGHIDNSa--------SStSSCLHQSAVRKTAYSHLSTSKRQSSSGHA
sstp    ilwtg  s p q    p    sad rrtn gt        nca   hy    gea h  f  aq h    rt
  qa             s      y         pfg r         r s   f                         
                                   v                                            
                                                                                
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                      .        . .              *            * ..    .  :::.    
VElhnIPPSSARsQSEGPilSCWWLqFRNSKPCSDYCLtHIVNLLEDWGPCTEhGEHnIRIPRTPARVTGGVFLVDKNPH
m fqhfssn t pk krslfp    k  dr     h  s li         a y   h                      
     v  g v     e vp                                     s                      
     l             s                                                            
                   x                                                            
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   *.   .   .   *       : * .. : * :   .   . . *  ..  *   .. : . :   . **       
NTTESRLVVDFSQFSRGSThVSWPKFAVPNLQSLTNLLSSNLSWLSLDVSAAFYHiPLHPAAMPHLLVGSSGLpRYVARL
  a                r                    d   i          l           i  c  sg     
                   q                                                     q      
                   k                                                            
                                                                                
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
.                        .             :     .     : :  *    :    *       :     
SSTSR--N-I----N----YQHGTMQDLHdSCSRNLYVSLLLLYKTFGRKLHLYSHPIILGFRKIPMGVGLSPFLLAQFT
       i f    h    hkyral n  nt  kh  d  m       q         v         l      m    
         n    d    nh        e    k                                             
         l                                                                      
                                                                                
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                       :             .     :   * .    . .  *    : *      .   . *
SAICSVVRRAFPHCLAFSYMDDVVLGAKSVQHLESLFTsiTNFLLSLGIHLNPNKTKRWGYSLNFMGYVIGsWGTLPQEH
      i            i        t     a y av    v        t         h      dc  s   d 
                   v                                 h                          
                                                                                
                                                                                
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   :     .  .   .                .     .  .  *: :.     **  .                    
IVlKiKQCFRKLPvNRPIDWKVCQRIVGLLGFAAPFTQCGYPALMPLYACIQsKQAFTFSPTYKAFLCKQYLnLYPVARQ
 iq l h      i           l                  l      ha       s   t   q  mh       
  h                                         k                   v       t       
                                                                                
                                                                                
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
. .   .    :   ..                         . :   . *           :    :  *      . .
RSGLCQVFADATPTGWGLAiGHrRMRGTFVAPLPIHTAELLAACFARSRSGAkLIGTDNSVVLSRKYTSFPWLLGCAANW
 p                 m  q l    m                      nil              y          
 a                 l  k                             t                           
                   v                                                            
                                                                                
                                                                                

       810       820       830       840       850       860       870      
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:.
 :            : :    *       .            .               .  :  *      .  * 
ILRGTSFVYVPSALNPADDPSRGRLGLYRPLLhLPFRPTTGRTSLYAVSPSVPSHLPdRVHFASPLHV--AWrPP-
                          i     r   q p        d      rp v                
                                c                        a                  
                                l                        g                  
                                s                                           
                                q                                           
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